
Velvety smooth cheesecake infused with fragrant vanilla bean seeds nestled on a buttery graham cracker crust and crowned with a glass-like layer of caramelized sugar creates an unforgettable dessert experience in a perfect individual portion. These Vanilla Bean Crème Brûlée Cheesecake Cupcakes deliver an exquisite textural symphony – the satisfying crack of torched sugar gives way to the silky-rich creaminess beneath, offering the best elements of two classic desserts in each elegant bite. The warm, floral notes of real vanilla bean permeate throughout, elevating the flavor profile beyond ordinary cheesecake while the brûléed top adds that dramatic presentation that makes these treats worthy of special occasions yet simple enough for an elevated everyday indulgence.
I first created these cupcakes for my sister's engagement party, wanting something elegant that didn't require formal plating. The moment guests heard that first satisfying crack of sugar breaking beneath their spoons, conversations paused and eyes closed in appreciation. Now they've become my signature dessert, requested for every family celebration. What makes them truly special is that perfect moment when the torch transforms ordinary sugar into a golden sheet of caramel – a bit of tableside theater that never fails to impress guests and makes the dessert feel truly special.
Essential Elements
- Cream cheese: Creates the silky-smooth base that defines these cupcakes.
- Vanilla bean: Provides intense, genuine vanilla flavor with beautiful visual appeal.
- Graham cracker crumbs: Form the foundation with honey-wheat flavor and perfect crumbly texture.
- Sour cream: Introduces subtle tanginess while creating an incomparably smooth texture.
- Granulated sugar: Sweetens the cheesecake and forms the caramelized topping.
- Eggs: Provide structure and richness while helping achieve a creamy texture.
- Unsalted butter: Binds the crust ingredients while adding rich flavor.
- All-purpose flour: Helps stabilize the filling and prevent cracking.
Preparation Method
- Crust Foundation:
- Preheat oven to 325°F (160°C). Mix graham cracker crumbs, sugar, and melted butter, pressing into cupcake liners.
- Flavor Infusion:
- Split a vanilla bean, scrape seeds, and mix into the cheesecake batter.
- Cheesecake Preparation:
- Beat cream cheese, sugar, sour cream, and vanilla bean seeds until smooth.
- Egg Incorporation:
- Add eggs one at a time, mixing gently to avoid incorporating too much air.
- Portioning and Baking:
- Divide batter into cupcake liners and bake for 18-22 minutes until centers are just set.
- Cooling Process:
- Turn off oven, crack door open, and allow gradual cooling before refrigerating overnight.
- Sugar Topping Preparation:
- Sprinkle superfine sugar evenly over chilled cheesecakes.
- Caramelization Technique:
- Use a culinary torch to melt and caramelize the sugar until golden brown.
- Final Presentation:
- Serve immediately for the best contrast between the crisp caramelized top and creamy cheesecake.

Serving Suggestions
Serve these elegant cupcakes with fresh berries and a dollop of lightly whipped cream. For a refined touch, place each on a plate drizzled with berry coulis. Pair with dessert wines like Sauternes or a strong espresso to balance the sweetness.
Creative Variations
Add maple syrup and toasted pecans for a fall variation. Infuse the batter with citrus zest for a bright, summery twist. For chocolate lovers, swap the graham cracker crust for crushed chocolate cookies and add melted dark chocolate to the batter.
Storage Solutions
Refrigerate untopped cheesecakes for up to three days. Apply sugar topping just before serving to maintain crispness. Freeze plain cheesecakes for up to one month, thawing overnight in the refrigerator before torching.

These Vanilla Bean Crème Brûlée Cheesecake Cupcakes have become a signature treat in my family, bringing people together with their perfect combination of texture and flavor. Watching guests crack through the caramelized top and savor the rich, creamy filling is a rewarding experience every time.
Frequently Asked Questions
- → Can I make these cheesecake cupcakes without a kitchen torch?
- Yes, you can place the sugar-topped cheesecakes under your oven's broiler for 1-2 minutes, but watch them constantly as they can burn quickly. The broiler won't give you quite the same control as a torch, but it will caramelize the sugar.
- → How far in advance can I make these cheesecake cupcakes?
- You can make the cheesecake cupcakes up to 3 days ahead and store them in the refrigerator. Just hold off on the caramelized sugar topping until right before serving for the best texture and that signature crack.
- → I can't find vanilla beans. What can I use instead?
- If you can't find vanilla beans, substitute with 2 teaspoons of pure vanilla extract or 1 teaspoon of vanilla bean paste which will still give you those lovely specks in the cheesecake.
- → Can I freeze these cheesecake cupcakes?
- Yes, you can freeze the baked and cooled cheesecake cupcakes (without the sugar topping) for up to 2 months. Wrap them individually in plastic wrap, then place in a freezer bag. Thaw overnight in the refrigerator and add the caramelized topping just before serving.
- → Why did my cheesecake cupcakes crack on top?
- Cracks usually happen when cheesecakes are overbaked or cooled too quickly. Make sure to remove them from the oven when the centers are still slightly jiggly, and let them cool at room temperature before refrigerating. The good news is that the caramelized sugar topping will hide any cracks!