
Cheesecake stuffed baked apples take the cozy flavor of baked apples and combine it with creamy cheesecake for a perfect cold-weather dessert. These are elegant enough for a fall dinner party but simple enough to whip up on a busy weeknight. They have quickly become one of my go-to autumn treats and always disappear fast at family gatherings.
When I first made these on a rainy October day my kitchen filled with the warm scent of cinnamon and apples and now my family requests them any time apple season rolls around.
Ingredients
- Apples: Granny Smith or Honeycrisp recommended. Tart and crisp apples hold their shape best and balance the sweet filling. Look for apples that are unblemished and heavy for their size.
- Cream cheese: Softened for easy mixing. This is the key to the creamy cheesecake filling. Use full-fat for the richest flavor.
- Sugar: Adds sweetness. Adjust to taste if you prefer a less-sweet filling. Choose white or raw sugar for a smooth blend.
- Vanilla extract: Enhances the cheesecake flavor. Go for pure vanilla extract over imitation for best results.
- Cinnamon: Warm spice that complements both apples and cheesecake. Use freshly ground for boldest flavor.
- Lemon juice: Brightens the filling and keeps apples from browning. Freshly squeezed is preferable for vibrant flavor.
- Graham cracker crumbs: Classic cheesecake flavor and a bit of crunch. Buy whole crackers and crush them for larger crumbs if you like a rustic touch.
- Butter: Melted to bind the crumb topping. Use unsalted butter to control the saltiness.
Step-by-Step Instructions
- Prepare the Apples:
- Wash your apples thoroughly and pat dry. Use a sharp paring knife or an apple corer to remove the core from each apple. Stop short of cutting through the bottom so you create a little well to hold your cheesecake filling. This way the filling will not leak out during baking. If needed, use a spoon to scoop out extra flesh and give yourself enough space for the filling.
- Make the Cheesecake Filling:
- Place softened cream cheese in a medium bowl along with the sugar, vanilla extract, and a pinch of cinnamon. Beat with a hand mixer or sturdy spatula until completely smooth and lump-free. Scrape down the bowl as you go so the filling is creamy and even.
- Fill the Apples:
- Spoon the cheesecake filling into each prepared apple. Press down gently with a spoon or your fingers to make sure the filling reaches the bottom of the well. Fill slightly over the top for a nice rounded look.
- Mix the Crumb Topping:
- In a separate small bowl, combine graham cracker crumbs, melted butter, and a sprinkle of cinnamon. Mix thoroughly until all crumbs are moist. If you want extra crunch, avoid pulverizing the crumbs too fine.
- Add the Crumb Topping:
- Take a scoop of the graham mixture and press it on top of each filled apple. Pat lightly so it adheres without spilling over. The topping becomes crisp and golden once baked.
- Arrange and Drizzle:
- Set the stuffed apples upright in a baking dish so they remain stable. Drizzle each one with lemon juice to keep them bright and lend a subtle zing that wakes up the flavors.
- Bake to Perfection:
- Place the dish in a preheated oven at 375 degrees Fahrenheit. Bake for twenty-five to thirty minutes or until the apples feel tender when poked with a fork and the cheesecake filling is mostly set with just a slight jiggle. If your apples are on the smaller side, check early to avoid overbaking.
- Cool and Serve:
- Take the apples out of the oven and let them cool five to ten minutes. This cooling time allows the filling to firm up a bit for easier eating. Serve warm for the coziest dessert experience.

For me the best part is that first spoonful when the warm apple mingles with the tangy cheesecake and spiced crumb. My kids love taking turns coring apples and sneaking tastes of the creamy filling.
Storage Tips
Store leftovers in an airtight container in the fridge for up to three days. These are delicious cold the next morning or reheated gently in the microwave. Avoid freezing as the texture of the cheesecake filling can become watery and the apples may lose their shape.
Ingredient Substitutions
If you need dairy-free, swap in a plant-based cream cheese and vegan butter. You can substitute brown sugar or coconut sugar for the classic white sugar for a deeper caramel note. If you do not have graham crackers, shortbread cookies or vanilla wafers crushed up will work well as a topping.
Serving Suggestions
Dress these baked apples up with a drizzle of warm caramel sauce or a dollop of whipped cream. For a festive fall dessert, top with candied pecans or granola for extra crunch. These pair perfectly with a mug of spiced chai tea or coffee.
Cultural and Historical Context
Baking apples stuffed with something sweet goes back generations in many cultures as a way to bring warmth and coziness to cool seasons. The American love of cheesecake and crumb toppings gives this version a playful twist that feels both modern and rooted in comfort food traditions.

Enjoy these warm, comforting baked apples with loved ones—it is sure to become a fall favorite!
Frequently Asked Questions
- → Which apple varieties work best for this dish?
Granny Smith and Honeycrisp apples are recommended for their firm texture and slightly tart flavor, which hold up well during baking.
- → Can the cheesecake filling be made ahead of time?
Yes, the cream cheese filling can be mixed and refrigerated up to a day in advance for easier preparation.
- → How can I ensure the apples don’t become too soft?
Bake just until the apples are fork-tender. Overbaking may cause them to collapse, losing their structure.
- → Is it possible to substitute graham crackers?
Crumble digestive biscuits or vanilla wafers can be used in place of graham crackers for a similar crunchy topping.
- → Should these apples be served warm or cold?
They are best served slightly warm, allowing the cheesecake center to remain creamy and the apple to be tender.